6DM6 image
Deposition Date 2018-06-04
Release Date 2019-06-12
Last Version Date 2023-11-15
Entry Detail
PDB ID:
6DM6
Keywords:
TRANSFERASE
Title:
Structure of DNA polymerase III subunit beta from Rickettsia conorii in complex with a natural product
Biological Source:
Source Organism:
Rickettsia conorii (strain ATCC VR-613 / Malish 7) (Taxon ID: 272944)
Streptomyces caelicus (Taxon ID: 1520516)
Host Organism:
Escherichia coli BL21(DE3)
Method Details:
Experimental Method:
X-RAY DIFFRACTION
Resolution:
2.25 Å
R-Value Free:
0.23
R-Value Work:
0.17
R-Value Observed:
0.18
Space Group:
P 1 21 1
6DM6 validation report
Macromolecular Entities
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Beta sliding clamp
Gene (Uniprot):dnaN
Chain IDs:A, B
Chain Length:387
Number of Molecules:2
Biological Source:Rickettsia conorii (strain ATCC VR-613 / Malish 7)
UniProt ID:Q92I37 Pfam ID:PF00712, PF02767, PF02768
Polymer Type:polypeptide(L)
Molecule:Natural product peptide
Chain IDs:C, D
Chain Length:11
Number of Molecules:2
Biological Source:Streptomyces caelicus
Peptide-like Molecules
PRD_002311
Primary Citation
Structure of DNA polymerase III subunit beta from Rickettsia conorii in complex with a natural product
to be published ? ? ? (?)
Primary Citation of related structures
6DM6