6DJK image
Deposition Date 2018-05-25
Release Date 2019-05-29
Last Version Date 2023-11-15
Entry Detail
PDB ID:
6DJK
Keywords:
DNA BINDING PROTEIN/INHIBITOR
Title:
Structure of DNA polymerase III subunit beta from Rickettsia typhi in complex with a natural product
Biological Source:
Source Organism:
Rickettsia typhi str. Wilmington (Taxon ID: 257363)
synthetic construct (Taxon ID: 32630)
Host Organism:
Escherichia coli
Method Details:
Experimental Method:
X-RAY DIFFRACTION
Resolution:
1.85 Å
R-Value Free:
0.21
R-Value Work:
0.17
R-Value Observed:
0.17
Space Group:
C 1 2 1
6DJK validation report
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Beta sliding clamp
Gene (Uniprot):dnaN
Chain IDs:A
Chain Length:389
Number of Molecules:1
Biological Source:Rickettsia typhi str. Wilmington
UniProt ID:Q68WW0 Pfam ID:PF00712, PF02767, PF02768
Polymer Type:polypeptide(L)
Molecule:ACE-MVA-MP8-NZC-LEU-MP8-LEU-MVA-PRO-MLU-GLY
Chain IDs:B
Chain Length:11
Number of Molecules:1
Biological Source:synthetic construct
Ligand Molecules
EDO
PEG
Peptide-like Molecules
PRD_002311
Primary Citation
Structure of DNA polymerase III subunit beta from Rickettsia typhi in complex with a natural product
to be published ? ? ? (?)
Primary Citation of related structures
6DJK