6DD3 image
Deposition Date 2018-05-09
Release Date 2018-07-04
Last Version Date 2024-03-13
Entry Detail
PDB ID:
6DD3
Keywords:
Title:
Crystal structure of the double mutant (D52N/D407A) of NT5C2-537X in the active state
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.98 Å
R-Value Free:
0.20
R-Value Work:
0.16
R-Value Observed:
0.16
Space Group:
I 2 2 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Cytosolic purine 5'-nucleotidase
Gene (Uniprot):NT5C2
Mutations:D52N, D407A
Chain IDs:A
Chain Length:536
Number of Molecules:1
Biological Source:Homo sapiens
Primary Citation
Structure and Mechanisms of NT5C2 Mutations Driving Thiopurine Resistance in Relapsed Lymphoblastic Leukemia.
Cancer Cell 34 136 147.e6 (2018)
PMID: 29990496 DOI: 10.1016/j.ccell.2018.06.003

Abstact

Activating mutations in the cytosolic 5'-nucleotidase II gene NT5C2 drive resistance to 6-mercaptopurine in acute lymphoblastic leukemia. Here we demonstrate that constitutively active NT5C2 mutations K359Q and L375F reconfigure the catalytic center for substrate access and catalysis in the absence of allosteric activator. In contrast, most relapse-associated mutations, which involve the arm segment and residues along the surface of the inter-monomeric cavity, disrupt a built-in switch-off mechanism responsible for turning off NT5C2. In addition, we show that the C-terminal acidic tail lost in the Q523X mutation functions to restrain NT5C2 activation. These results uncover dynamic mechanisms of enzyme regulation targeted by chemotherapy resistance-driving NT5C2 mutations, with important implications for the development of NT5C2 inhibitor therapies.

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Primary Citation of related structures