6D65 image
Deposition Date 2018-04-20
Release Date 2018-09-19
Last Version Date 2023-10-04
Entry Detail
PDB ID:
6D65
Keywords:
Title:
Crystal structure of the human dual specificity phosphatase 1 catalytic domain (C258S) as a maltose binding protein fusion in complex with the designed AR protein off7
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
2.35 Å
R-Value Free:
0.24
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
P 21 21 21
Macromolecular Entities
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Maltose-binding periplasmic protein,Dual specificity protein phosphatase 1
Gene (Uniprot):malE, DUSP1
Mutagens:D82A, K83A, E172A, N173A, K239A, E362A, D363A, C258S
Chain IDs:A, C
Chain Length:520
Number of Molecules:2
Biological Source:Escherichia coli (strain K12), Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Designed AR protein off7
Chain IDs:B, D
Chain Length:169
Number of Molecules:2
Biological Source:synthetic construct
Primary Citation
MBP-binding DARPins facilitate the crystallization of an MBP fusion protein.
Acta Crystallogr F Struct Biol Commun 74 549 557 (2018)
PMID: 30198887 DOI: 10.1107/S2053230X18009901

Abstact

The production of high-quality crystals is the main bottleneck in determining the structures of proteins using X-ray crystallography. In addition to being recognized as a very effective solubility-enhancing fusion partner, Escherichia coli maltose-binding protein (MBP) has also been successfully employed as a `fixed-arm' crystallization chaperone in more than 100 cases. Here, it is reported that designed ankyrin-repeat proteins (DARPins) that bind with high affinity to MBP can promote the crystallization of an MBP fusion protein when the fusion protein alone fails to produce diffraction-quality crystals. As a proof of principle, three different co-crystal structures of MBP fused to the catalytic domain of human dual-specificity phosphatase 1 in complex with DARPins are reported.

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Primary Citation of related structures
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