6D4G image
Deposition Date 2018-04-18
Release Date 2018-09-12
Last Version Date 2023-10-04
Entry Detail
PDB ID:
6D4G
Keywords:
Title:
N-GTPase domain of p190RhoGAP-A
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.80 Å
R-Value Free:
0.29
R-Value Work:
0.24
R-Value Observed:
0.25
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Rho GTPase-activating protein 35
Gene (Uniprot):Arhgap35
Chain IDs:A, B
Chain Length:271
Number of Molecules:2
Biological Source:Rattus norvegicus
Primary Citation
The N-Terminal GTPase Domain of p190RhoGAP Proteins Is a PseudoGTPase.
Structure 26 1451 ? (2018)
PMID: 30174148 DOI: 10.1016/j.str.2018.07.015

Abstact

The pseudoGTPases are a rapidly growing and important group of pseudoenzymes. p190RhoGAP proteins are critical regulators of Rho signaling and contain two previously identified pseudoGTPase domains. Here we report that p190RhoGAP proteins contain a third pseudoGTPase domain, termed N-GTPase. We find that GTP constitutively purifies with the N-GTPase domain, and a 2.8-Å crystal structure of p190RhoGAP-A co-purified with GTP reveals an unusual GTP-Mg2+ binding pocket. Six inserts in N-GTPase indicate perturbed catalytic activity and inability to bind to canonical GTPase activating proteins, guanine nucleotide exchange factors, and effector proteins. Biochemical analysis shows that N-GTPase does not detectably hydrolyze GTP, and exchanges nucleotide only under harsh Mg2+ chelation. Furthermore, mutational analysis shows that GTP and Mg2+ binding stabilizes the domain. Therefore, our results support that N-GTPase is a nucleotide binding, non-hydrolyzing, pseudoGTPase domain that may act as a protein-protein interaction domain. Thus, unique among known proteins, p190RhoGAPs contain three pseudoGTPase domains.

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