6D01 image
Deposition Date 2018-04-09
Release Date 2018-06-13
Last Version Date 2024-10-23
Entry Detail
PDB ID:
6D01
Keywords:
Title:
Crystal structure of 1210 Fab in complex with circumsporozoite protein NANP5
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.20 Å
R-Value Free:
0.22
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
C 1 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:1210 Antibody, heavy chain
Chain IDs:A, C, E, G
Chain Length:226
Number of Molecules:4
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:1210 Antibody, Light chain
Chain IDs:B, D, F, H
Chain Length:213
Number of Molecules:4
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:NANP5
Chain IDs:I, J
Chain Length:20
Number of Molecules:2
Biological Source:Plasmodium falciparum
Primary Citation
Antihomotypic affinity maturation improves human B cell responses against a repetitive epitope.
Science 360 1358 1362 (2018)
PMID: 29880723 DOI: 10.1126/science.aar5304

Abstact

Affinity maturation selects B cells expressing somatically mutated antibody variants with improved antigen-binding properties to protect from invading pathogens. We determined the molecular mechanism underlying the clonal selection and affinity maturation of human B cells expressing protective antibodies against the circumsporozoite protein of the malaria parasite Plasmodium falciparum (PfCSP). We show in molecular detail that the repetitive nature of PfCSP facilitates direct homotypic interactions between two PfCSP repeat-bound monoclonal antibodies, thereby improving antigen affinity and B cell activation. These data provide a mechanistic explanation for the strong selection of somatic mutations that mediate homotypic antibody interactions after repeated parasite exposure in humans. Our findings demonstrate a different mode of antigen-mediated affinity maturation to improve antibody responses to PfCSP and presumably other repetitive antigens.

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Primary Citation of related structures