6CWU image
Deposition Date 2018-03-31
Release Date 2018-10-31
Last Version Date 2023-10-04
Entry Detail
PDB ID:
6CWU
Keywords:
Title:
Protein Tyrosine Phosphatase 1B F135Y mutant
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.08 Å
R-Value Free:
0.29
R-Value Work:
0.25
R-Value Observed:
0.25
Space Group:
P 31 2 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Tyrosine-protein phosphatase non-receptor type 1
Gene (Uniprot):PTPN1
Mutagens:F135Y
Chain IDs:A
Chain Length:329
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Evolutionarily Conserved Allosteric Communication in Protein Tyrosine Phosphatases.
Biochemistry 57 6443 6451 (2018)
PMID: 30289703 DOI: 10.1021/acs.biochem.8b00656

Abstact

Protein tyrosine phosphatases (PTPs) are an important class of regulatory enzymes that exhibit aberrant activities in a wide range of diseases. A detailed mapping of allosteric communication in these enzymes could, thus, reveal the structural basis of physiologically relevant-and, perhaps, therapeutically informative-perturbations (i.e., mutations, post-translational modifications, or binding events) that influence their catalytic states. This study combines detailed biophysical studies of protein tyrosine phosphatase 1B (PTP1B) with bioinformatic analyses of the PTP family to examine allosteric communication in this class of enzymes. Results of X-ray crystallography, molecular dynamics simulations, and sequence-based statistical analyses indicate that PTP1B possesses a broadly distributed allosteric network that is evolutionarily conserved across the PTP family, and findings from both kinetic studies and mutational analyses show that this network is functionally intact in sequence-diverse PTPs. The allosteric network resolved in this study reveals new sites for targeting allosteric inhibitors of PTPs and helps explain the functional influence of a diverse set of disease-associated mutations.

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Primary Citation of related structures