6CUV image
Deposition Date 2018-03-26
Release Date 2018-09-26
Last Version Date 2023-11-15
Entry Detail
PDB ID:
6CUV
Keywords:
Title:
Engineered Holo TrpB from Pyrococcus furiosus, PfTrpB7E6
Biological Source:
Method Details:
Experimental Method:
Resolution:
2.26 Å
R-Value Free:
0.25
R-Value Work:
0.21
R-Value Observed:
0.21
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Tryptophan synthase beta chain 1
Gene (Uniprot):trpB1
Mutations:I16V, E17G, L91P, F95L, L161A, V173E, F274L, T292S, V384A
Chain IDs:A, B, C, D
Chain Length:388
Number of Molecules:4
Biological Source:Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
LLP A LYS modified residue
Primary Citation
Engineered Biosynthesis of beta-Alkyl Tryptophan Analogues.
Angew. Chem. Int. Ed. Engl. 57 14764 14768 (2018)
PMID: 30215880 DOI: 10.1002/anie.201807998

Abstact

Noncanonical amino acids (ncAAs) with dual stereocenters at the α and β positions are valuable precursors to natural products and therapeutics. Despite the potential applications of such bioactive β-branched ncAAs, their availability is limited due to the inefficiency of the multistep methods used to prepare them. Herein we report a stereoselective biocatalytic synthesis of β-branched tryptophan analogues using an engineered variant of Pyrococcus furiosus tryptophan synthase (PfTrpB), PfTrpB7E6 . PfTrpB7E6 is the first biocatalyst to synthesize bulky β-branched tryptophan analogues in a single step, with demonstrated access to 27 ncAAs. The molecular basis for the efficient catalysis and broad substrate tolerance of PfTrpB7E6 was explored through X-ray crystallography and UV/Vis spectroscopy, which revealed that a combination of active-site and remote mutations increase the abundance and persistence of a key reactive intermediate. PfTrpB7E6 provides an operationally simple and environmentally benign platform for the preparation of β-branched tryptophan building blocks.

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Primary Citation of related structures