6CSL image
Deposition Date 2018-03-20
Release Date 2018-06-13
Last Version Date 2024-03-13
Entry Detail
PDB ID:
6CSL
Title:
Pneumococcal PhtD protein 269-339 fragment with bound Zn(II)
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
1.92 Å
R-Value Free:
0.19
R-Value Work:
0.14
R-Value Observed:
0.15
Space Group:
C 1 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Histidine triad protein D
Chain IDs:A
Chain Length:71
Number of Molecules:1
Biological Source:Streptococcus pneumoniae
Ligand Molecules
Primary Citation
Structural characterisation of the HT3 motif of the polyhistidine triad protein D from Streptococcus pneumoniae.
FEBS Lett. 592 2341 2350 (2018)
PMID: 29856892 DOI: 10.1002/1873-3468.13122

Abstact

The bacterium Streptococcus pneumoniae (the pneumococcus) is a major human pathogen that requires Zn2+ for its survival and virulence in the host environment. Polyhistidine triad protein D (PhtD) has a known role in pneumococcal Zn2+ homeostasis. However, the mechanistic basis of PhtD function remains unclear, partly due to a lack of structural information. Here, we determined the crystal structure of the fragment PhtD269-339 , containing the third Zn2+ -binding histidine triad (HT) motif of the protein. Analysis of the structure suggests that Zn2+ binding occurs at the surface of the protein and that all five HT motifs in the protein bind Zn2+ and share similar structures. These new structural insights aid in our understanding of how the Pht proteins facilitate pneumococcal Zn2+ acquisition.

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Primary Citation of related structures