6CS9 image
Deposition Date 2018-03-20
Release Date 2018-07-25
Last Version Date 2024-11-20
Entry Detail
PDB ID:
6CS9
Title:
Crystal structure of human beta-defensin 2 in complex with PIP2
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.85 Å
R-Value Free:
0.22
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Beta-defensin 4A
Gene (Uniprot):DEFB4A, DEFB4B
Chain IDs:A, B
Chain Length:41
Number of Molecules:2
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Human beta-defensin 2 killsCandida albicansthrough phosphatidylinositol 4,5-bisphosphate-mediated membrane permeabilization.
Sci Adv 4 eaat0979 eaat0979 (2018)
PMID: 30050988 DOI: 10.1126/sciadv.aat0979

Abstact

Human defensins belong to a subfamily of the cationic antimicrobial peptides and act as a first line of defense against invading microbes. Their often broad-spectrum antimicrobial and antitumor activities make them attractive for therapeutic development; however, their precise molecular mechanism(s) of action remains to be defined. We show that human β-defensin 2 (HBD-2) permeabilizes Candida albicans cell membranes via a mechanism targeting the plasma membrane lipid phosphatidylinositol 4,5-bisphosphate (PIP2). We determined the structure of HBD-2 bound to PIP2, which revealed two distinct PIP2-binding sites, and showed, using functional assays, that mutations in these sites ablate PIP2-mediated fungal growth inhibition by HBD-2. Our study provides the first insight into lipid-mediated human defensin membrane permeabilization at an atomic level and reveals a unique mode of lipid engagement to permeabilize cell membranes.

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Primary Citation of related structures