6CRL image
Deposition Date 2018-03-19
Release Date 2018-10-10
Last Version Date 2024-05-01
Entry Detail
PDB ID:
6CRL
Keywords:
Title:
HusA haemophore from Porphyromonas gingivalis
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Conformers Calculated:
100
Conformers Submitted:
21
Selection Criteria:
structures with the lowest energy
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:hypothetical protein PG_2227
Gene (Uniprot):PG_2227
Chain IDs:A
Chain Length:201
Number of Molecules:1
Biological Source:Porphyromonas gingivalis W83
Ligand Molecules
Primary Citation
Structural properties of a haemophore facilitate targeted elimination of the pathogen Porphyromonas gingivalis.
Nat Commun 9 4097 4097 (2018)
PMID: 30291238 DOI: 10.1038/s41467-018-06470-0

Abstact

Porphyromonas gingivalis is a keystone bacterial pathogen of chronic periodontitis. P. gingivalis is unable to synthesise the porphyrin macrocycle and relies on exogenous porphyrin, including haem or haem biosynthesis intermediates from host sources. We show that under the iron-limited conditions prevailing in tissue environments, P. gingivalis expresses a haemophore-like protein, HusA, to mediate the uptake of essential porphyrin and support pathogen survival within epithelial cells. The structure of HusA, together with titration studies, mutagenesis and in silico docking, show that haem binds in a hydrophobic groove on the α-helical structure without the typical iron coordination seen in other haemophores. This mode of interaction allows HusA to bind to a variety of abiotic and metal-free porphyrins with higher affinities than to haem. We exploit this unusual porphyrin-binding activity of HusA to target a prototypic deuteroporphyrin-metronidazole conjugate with restricted antimicrobial specificity in a Trojan horse strategy that effectively kills intracellular P. gingivalis.

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Primary Citation of related structures