6CQF image
Entry Detail
PDB ID:
6CQF
Title:
Crystal structure of HPK1 in complex an inhibitor G1858
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2018-03-15
Release Date:
2018-12-19
Method Details:
Experimental Method:
Resolution:
2.25 Å
R-Value Free:
0.25
R-Value Work:
0.20
R-Value Observed:
0.21
Space Group:
C 2 2 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Mitogen-activated protein kinase kinase kinase kinase 1
Chain IDs:A
Chain Length:297
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Hematopoietic Progenitor Kinase-1 Structure in a Domain-Swapped Dimer.
Structure 27 125 133.e4 (2019)
PMID: 30503777 DOI: 10.1016/j.str.2018.10.025

Abstact

Enhancement of antigen-specific T cell immunity has shown significant therapeutic benefit in infectious diseases and cancer. Hematopoietic progenitor kinase-1 (HPK1) is a negative-feedback regulator of T cell receptor signaling, which dampens T cell proliferation and effector function. A recent report showed that a catalytic dead mutant of HPK1 phenocopies augmented T cell responses observed in HPK1-knockout mice, indicating that kinase activity is critical for function. We evaluated active and inactive mutants and determined crystal structures of HPK1 kinase domain (HPK1-KD) in apo and ligand bound forms. In all structures HPK1-KD displays a rare domain-swapped dimer, in which the activation segment comprises a well-conserved dimer interface. Biophysical measurements show formation of dimer in solution. The activation segment adopts an α-helical structure which exhibits distinct orientations in active and inactive states. This face-to-face configuration suggests that the domain-swapped dimer may possess alternative selectivity for certain substrates of HPK1 under relevant cellular context.

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Primary Citation of related structures