6CQ6 image
Deposition Date 2018-03-14
Release Date 2018-03-28
Last Version Date 2024-11-06
Entry Detail
PDB ID:
6CQ6
Title:
K2P2.1(TREK-1) apo structure
Biological Source:
Source Organism:
Mus musculus (Taxon ID: 10090)
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.10 Å
R-Value Free:
0.30
R-Value Work:
0.26
R-Value Observed:
0.26
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Potassium channel subfamily K member 2
Gene (Uniprot):Kcnk2
Mutations:K65R, Q66E, T67K, I69L, A70R, Q71A, A73P, N76S, S77D, T78Q, S281A, E287A
Chain IDs:A, B
Chain Length:312
Number of Molecules:2
Biological Source:Mus musculus
Primary Citation
K2P2.1 (TREK-1)-activator complexes reveal a cryptic selectivity filter binding site.
Nature 547 364 368 (2017)
PMID: 28693035 DOI: 10.1038/nature22988

Abstact

Polymodal thermo- and mechanosensitive two-pore domain potassium (K2P) channels of the TREK subfamily generate 'leak' currents that regulate neuronal excitability, respond to lipids, temperature and mechanical stretch, and influence pain, temperature perception and anaesthetic responses. These dimeric voltage-gated ion channel (VGIC) superfamily members have a unique topology comprising two pore-forming regions per subunit. In contrast to other potassium channels, K2P channels use a selectivity filter 'C-type' gate as the principal gating site. Despite recent advances, poor pharmacological profiles of K2P channels limit mechanistic and biological studies. Here we describe a class of small-molecule TREK activators that directly stimulate the C-type gate by acting as molecular wedges that restrict interdomain interface movement behind the selectivity filter. Structures of K2P2.1 (also known as TREK-1) alone and with two selective K2P2.1 (TREK-1) and K2P10.1 (TREK-2) activators-an N-aryl-sulfonamide, ML335, and a thiophene-carboxamide, ML402-define a cryptic binding pocket unlike other ion channel small-molecule binding sites and, together with functional studies, identify a cation-π interaction that controls selectivity. Together, our data reveal a druggable K2P site that stabilizes the C-type gate 'leak mode' and provide direct evidence for K2P selectivity filter gating.

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Primary Citation of related structures