6CMV image
Deposition Date 2018-03-06
Release Date 2018-11-14
Last Version Date 2024-11-13
Entry Detail
PDB ID:
6CMV
Keywords:
Title:
Crystal structure of Archaeal Biofilm Regulator (AbfR2) from Sulfolobus acidocaldarius
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
2.45 Å
R-Value Free:
0.21
R-Value Work:
0.16
R-Value Observed:
0.16
Space Group:
P 1 21 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Transcriptional regulator Lrs14-like protein
Chain IDs:A, B, C, D, E, F
Chain Length:139
Number of Molecules:6
Biological Source:Sulfolobus acidocaldarius
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
MSE A MET modified residue
Primary Citation
Crystal structure of an Lrs14-like archaeal biofilm regulator from Sulfolobus acidocaldarius.
Acta Crystallogr D Struct Biol 74 1105 1114 (2018)
PMID: 30387769 DOI: 10.1107/S2059798318014146

Abstact

The small winged helix-turn-helix (wHTH) proteins of the Lrs14 family are major transcriptional regulators and act as archaeal biofilm regulators (AbfRs) in the crenarchaeote Sulfolobus acidocaldarius. Here, the first crystal structure of an AbfR ortholog, AbfR2, the deletion of which is known to impair biofilm formation, is presented. Like most other wHTH orthologs, AbfR2 is dimeric in solution as well as in its 2.45 Å resolution crystal structure. Given the presence of three independent AbfR2 dimers in the asymmetric unit, the crystal structure shows a considerable degree of conformational variation within the dimer, the antiparallel orientations of which are stabilized by coiled-coil interaction between H4 helices. Conserved anchor interactions between helices H0 and H4 of AbfR2 further contribute to dimer stabilization. The combined structural and bioinformatic analysis reveals cluster-specific structural differences between different members of the Lrs14 protein family.

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Primary Citation of related structures