6CL4 image
Deposition Date 2018-03-01
Release Date 2019-03-13
Last Version Date 2023-10-04
Entry Detail
PDB ID:
6CL4
Keywords:
Title:
LipC12 - Lipase from metagenomics
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.64 Å
R-Value Free:
0.25
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
P 41 2 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Lipase C12
Gene (Uniprot):lipc12
Chain IDs:A
Chain Length:313
Number of Molecules:1
Biological Source:uncultured bacterium
Primary Citation
Structure solution and analyses of the first true lipase obtained from metagenomics indicate potential for increased thermostability.
N Biotechnol 53 65 72 (2019)
PMID: 31306784 DOI: 10.1016/j.nbt.2019.07.001

Abstact

Metagenomics is a modern approach to discovery of new enzymes with novel properties. This article reports the structure of a new lipase, belonging to family I.1, obtained by means of metagenomics. Its structure presents a fold typical of α/β hydrolases, with the lid in closed conformation. The protein was previously shown to present high thermostability and to be stable in aqueous solutions of polar organic solvents at high concentrations [30% (V/V)]. Molecular dynamics studies showed that the protein maintains its structure well in organic solvents. They also suggested that its thermostability might be enhanced if it were mutated to present a disulfide bond similar to that typically found in lipase family I.2. These findings identify this lipase as a good candidate for further improvement through protein engineering.

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Primary Citation of related structures