6CDI image
Deposition Date 2018-02-08
Release Date 2018-05-16
Last Version Date 2024-12-25
Entry Detail
PDB ID:
6CDI
Keywords:
Title:
Cryo-EM structure at 3.6 A resolution of vaccine-elicited antibody vFP16.02 in complex with HIV-1 Env BG505 DS-SOSIP, and antibodies VRC03 and PGT122
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.60 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Glycoprotein gp41
Gene (Uniprot):env
Chain IDs:A (auth: c), I (auth: A), Q (auth: D)
Chain Length:153
Number of Molecules:3
Biological Source:Human immunodeficiency virus 1
Polymer Type:polypeptide(L)
Molecule:Glycoprotein 120
Gene (Uniprot):env
Chain IDs:B (auth: d), J (auth: 2), R (auth: C)
Chain Length:473
Number of Molecules:3
Biological Source:Human immunodeficiency virus 1
Polymer Type:polypeptide(L)
Molecule:vFP16.02 Heavy Chain
Chain IDs:G (auth: h), O (auth: 3), W (auth: H)
Chain Length:211
Number of Molecules:3
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:vFP16.02 Light Chain
Chain IDs:H (auth: l), P (auth: 4), X (auth: L)
Chain Length:216
Number of Molecules:3
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:PGT122 Heavy Chain
Chain IDs:D (auth: m), L (auth: 5), T (auth: M)
Chain Length:132
Number of Molecules:3
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:PGT122 Light Chain
Chain IDs:C (auth: n), K (auth: 6), S (auth: N)
Chain Length:107
Number of Molecules:3
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:VRC03 Heavy Chain
Chain IDs:F (auth: q), N (auth: 8), V (auth: Q)
Chain Length:227
Number of Molecules:3
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:VRC03 light chain
Chain IDs:E (auth: r), M (auth: 7), U (auth: R)
Chain Length:102
Number of Molecules:3
Biological Source:Homo sapiens
Primary Citation

Abstact

A central goal of HIV-1 vaccine research is the elicitation of antibodies capable of neutralizing diverse primary isolates of HIV-1. Here we show that focusing the immune response to exposed N-terminal residues of the fusion peptide, a critical component of the viral entry machinery and the epitope of antibodies elicited by HIV-1 infection, through immunization with fusion peptide-coupled carriers and prefusion stabilized envelope trimers, induces cross-clade neutralizing responses. In mice, these immunogens elicited monoclonal antibodies capable of neutralizing up to 31% of a cross-clade panel of 208 HIV-1 strains. Crystal and cryoelectron microscopy structures of these antibodies revealed fusion peptide conformational diversity as a molecular explanation for the cross-clade neutralization. Immunization of guinea pigs and rhesus macaques induced similarly broad fusion peptide-directed neutralizing responses, suggesting translatability. The N terminus of the HIV-1 fusion peptide is thus a promising target of vaccine efforts aimed at eliciting broadly neutralizing antibodies.

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Primary Citation of related structures