6CDE image
Deposition Date 2018-02-08
Release Date 2018-05-16
Last Version Date 2024-12-25
Entry Detail
PDB ID:
6CDE
Keywords:
Title:
Cryo-EM structure at 3.8 A resolution of vaccine-elicited antibody vFP20.01 in complex with HIV-1 Env BG505 DS-SOSIP, and antibodies VRC03 and PGT122
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.80 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Glycoprotein 120
Gene (Uniprot):env
Chain IDs:H (auth: C), P (auth: c), V (auth: 2)
Chain Length:473
Number of Molecules:3
Biological Source:Human immunodeficiency virus 1
Polymer Type:polypeptide(L)
Molecule:Glycoprotein 41
Gene (Uniprot):env
Chain IDs:G (auth: D), O (auth: d), U (auth: 1)
Chain Length:153
Number of Molecules:3
Biological Source:Human immunodeficiency virus 1
Polymer Type:polypeptide(L)
Molecule:PGT122 Heavy chain
Chain IDs:C (auth: M), K (auth: m), Q (auth: 7)
Chain Length:228
Number of Molecules:3
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:PGT122 Light Chain
Chain IDs:D (auth: N), L (auth: n), R (auth: 8)
Chain Length:210
Number of Molecules:3
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:VRC03 Heavy Chain
Chain IDs:F (auth: Q), N (auth: q), T (auth: 5)
Chain Length:227
Number of Molecules:3
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:VRC03 Light Chain
Chain IDs:E (auth: R), M (auth: r), S (auth: 6)
Chain Length:208
Number of Molecules:3
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:vFP20.01 Heavy Chain
Chain IDs:A (auth: h), I (auth: H), W (auth: 3)
Chain Length:211
Number of Molecules:3
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:vFP20.01 Light chain
Chain IDs:B (auth: l), J (auth: L), X (auth: 4)
Chain Length:216
Number of Molecules:3
Biological Source:Homo sapiens
Primary Citation

Abstact

A central goal of HIV-1 vaccine research is the elicitation of antibodies capable of neutralizing diverse primary isolates of HIV-1. Here we show that focusing the immune response to exposed N-terminal residues of the fusion peptide, a critical component of the viral entry machinery and the epitope of antibodies elicited by HIV-1 infection, through immunization with fusion peptide-coupled carriers and prefusion stabilized envelope trimers, induces cross-clade neutralizing responses. In mice, these immunogens elicited monoclonal antibodies capable of neutralizing up to 31% of a cross-clade panel of 208 HIV-1 strains. Crystal and cryoelectron microscopy structures of these antibodies revealed fusion peptide conformational diversity as a molecular explanation for the cross-clade neutralization. Immunization of guinea pigs and rhesus macaques induced similarly broad fusion peptide-directed neutralizing responses, suggesting translatability. The N terminus of the HIV-1 fusion peptide is thus a promising target of vaccine efforts aimed at eliciting broadly neutralizing antibodies.

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Primary Citation of related structures