6C9Q image
Entry Detail
PDB ID:
6C9Q
Title:
Mycobacterium tuberculosis adenosine kinase bound to 5'-aminoadenosine
Biological Source:
Host Organism:
PDB Version:
Deposition Date:
2018-01-28
Release Date:
2019-05-01
Method Details:
Experimental Method:
Resolution:
1.95 Å
R-Value Free:
0.20
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
P 31 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Adenosine kinase
Chain IDs:A
Chain Length:331
Number of Molecules:1
Biological Source:Mycobacterium tuberculosis
Ligand Molecules
Primary Citation
Structure-Guided Drug Design of 6-Substituted Adenosine Analogues as Potent Inhibitors of Mycobacterium tuberculosis Adenosine Kinase.
J.Med.Chem. 62 4483 4499 (2019)
PMID: 31002508 DOI: 10.1021/acs.jmedchem.9b00020

Abstact

Mycobacterium tuberculosis adenosine kinase (MtbAdoK) is an essential enzyme of Mtb and forms part of the purine salvage pathway within mycobacteria. Evidence suggests that the purine salvage pathway might play a crucial role in Mtb survival and persistence during its latent phase of infection. In these studies, we adopted a structural approach to the discovery, structure-guided design, and synthesis of a series of adenosine analogues that displayed inhibition constants ranging from 5 to 120 nM against the enzyme. Two of these compounds exhibited low micromolar activity against Mtb with half maximal effective inhibitory concentrations of 1.7 and 4.0 μM. Our selectivity and preliminary pharmacokinetic studies showed that the compounds possess a higher degree of specificity against MtbAdoK when compared with the human counterpart and are well tolerated in rodents, respectively. Finally, crystallographic studies showed the molecular basis of inhibition, potency, and selectivity and revealed the presence of a potentially therapeutically relevant cavity unique to the MtbAdoK homodimer.

Legend

Protein

Chemical

Disease

Primary Citation of related structures