6C4G image
Deposition Date 2018-01-11
Release Date 2018-06-13
Last Version Date 2024-10-16
Entry Detail
PDB ID:
6C4G
Keywords:
Title:
Plasmepsin V from Plasmodium vivax bound to a transition state mimetic (WEHI-601)
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.39 Å
R-Value Free:
0.23
R-Value Work:
0.18
R-Value Observed:
0.19
Space Group:
C 2 2 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Aspartic protease PM5
Chain IDs:A
Chain Length:444
Number of Molecules:1
Biological Source:Plasmodium vivax
Peptide-like Molecules
PRD_002302
Primary Citation
Enhanced antimalarial activity of plasmepsin V inhibitors by modification of the P2position of PEXEL peptidomimetics.
Eur J Med Chem 154 182 198 (2018)
PMID: 29800827 DOI: 10.1016/j.ejmech.2018.05.022

Abstact

Plasmepsin V is an aspartyl protease that plays a critical role in the export of proteins bearing the Plasmodium export element (PEXEL) motif (RxLxQ/E/D) to the infected host erythrocyte, and thus the survival of the malaria parasite. Previously, development of transition state PEXEL mimetic inhibitors of plasmepsin V have primarily focused on demonstrating the importance of the P3 Arg and P1 Leu in binding affinity and selectivity. Here, we investigate the importance of the P2 position by incorporating both natural and non-natural amino acids into this position and show disubstituted beta-carbon amino acids convey the greatest potency. Consequently, we show analogues with either cyclohexylglycine or phenylglycine in the P2 position are the most potent inhibitors of plasmepsin V that impair processing of the PEXEL motif in exported proteins resulting in death of P. falciparum asexual stage parasites.

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Primary Citation of related structures