6C3E image
Entry Detail
PDB ID:
6C3E
Title:
CRYSTAL STRUCTURE OF RIP1 KINASE BOUND TO INHIBITOR
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2018-01-09
Release Date:
2018-03-21
Method Details:
Experimental Method:
Resolution:
2.60 Å
R-Value Free:
0.30
R-Value Work:
0.25
R-Value Observed:
0.26
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Receptor-interacting serine/threonine-protein kinase 1
Chain IDs:A, B
Chain Length:297
Number of Molecules:2
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Discovery of 7-Oxo-2,4,5,7-tetrahydro-6 H-pyrazolo[3,4- c]pyridine Derivatives as Potent, Orally Available, and Brain-Penetrating Receptor Interacting Protein 1 (RIP1) Kinase Inhibitors: Analysis of Structure-Kinetic Relationships.
J. Med. Chem. 61 2384 2409 (2018)
PMID: 29485864 DOI: 10.1021/acs.jmedchem.7b01647

Abstact

We report the discovery of 7-oxo-2,4,5,7-tetrahydro-6 H-pyrazolo[3,4- c]pyridine derivatives as a novel class of receptor interacting protein 1 (RIP1) kinase inhibitors. On the basis of the overlay study between HTS hit 10 and GSK2982772 (6) in RIP1 kinase, we designed and synthesized a novel class of RIP1 kinase inhibitor 11 possessing moderate RIP1 kinase inhibitory activity and P-gp mediated efflux. The optimization of the core structure and the exploration of appropriate substituents utilizing SBDD approach led to the discovery of 22, a highly potent, orally available, and brain-penetrating RIP1 kinase inhibitor with excellent PK profiles. Compound 22 significantly suppressed necroptotic cell death both in mouse and human cells. Oral administration of 22 (10 mg/kg, bid) attenuated disease progression in the mouse experimental autoimmune encephalomyelitis (EAE) model of multiple sclerosis (MS). Moreover, analysis of structure-kinetic relationship (SKR) for our novel chemical series was also discussed.

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Primary Citation of related structures