6BZH image
Deposition Date 2017-12-24
Release Date 2018-01-17
Last Version Date 2023-10-04
Entry Detail
PDB ID:
6BZH
Keywords:
Title:
Structure of mouse RIG-I tandem CARDs
Biological Source:
Source Organism:
Mus musculus (Taxon ID: 10090)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.50 Å
R-Value Free:
0.27
R-Value Work:
0.22
R-Value Observed:
0.22
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Probable ATP-dependent RNA helicase DDX58
Gene (Uniprot):Rigi
Chain IDs:A, B, C, D, E
Chain Length:194
Number of Molecules:5
Biological Source:Mus musculus
Primary Citation
Identification of a second binding site on the TRIM25 B30.2 domain.
Biochem. J. 475 429 440 (2018)
PMID: 29259080 DOI: 10.1042/BCJ20170427

Abstact

The retinoic acid-inducible gene-I (RIG-I) receptor recognizes short 5'-di- and triphosphate base-paired viral RNA and is a critical mediator of the innate immune response against viruses such as influenza A, Ebola, HIV and hepatitis C. This response is reported to require an orchestrated interaction with the tripartite motif 25 (TRIM25) B30.2 protein-interaction domain. Here, we present a novel second RIG-I-binding interface on the TRIM25 B30.2 domain that interacts with CARD1 and CARD2 (caspase activation and recruitment domains) of RIG-I and is revealed by the removal of an N-terminal α-helix that mimics dimerization of the full-length protein. Further characterization of the TRIM25 coiled-coil and B30.2 regions indicated that the B30.2 domains move freely on a flexible tether, facilitating RIG-I CARD recruitment. The identification of a dual binding mode for the TRIM25 B30.2 domain is a first for the SPRY/B30.2 domain family and may be a feature of other SPRY/B30.2 family members.

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Primary Citation of related structures