6BZ3 image
Deposition Date 2017-12-22
Release Date 2018-04-04
Last Version Date 2023-10-04
Entry Detail
PDB ID:
6BZ3
Title:
Complex structure of FAK FAT domain and DCC P3 motif
Biological Source:
Source Organism:
Mus musculus (Taxon ID: 10090)
Rattus norvegicus (Taxon ID: 10116)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.50 Å
R-Value Free:
0.26
R-Value Work:
0.22
R-Value Observed:
0.22
Space Group:
C 1 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Focal adhesion kinase 1
Gene (Uniprot):Ptk2
Chain IDs:A, C
Chain Length:126
Number of Molecules:2
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Molecule:Netrin receptor DCC
Gene (Uniprot):Dcc
Chain IDs:B, D
Chain Length:23
Number of Molecules:2
Biological Source:Rattus norvegicus
Ligand Molecules
Primary Citation
The binding of DCC-P3 motif and FAK-FAT domain mediates the initial step of netrin-1/DCC signaling for axon attraction.
Cell Discov 4 8 8 (2018)
PMID: 29479476 DOI: 10.1038/s41421-017-0008-8

Abstact

Netrin-1 plays a key role in axon guidance through binding to its receptor, Deleted in Colorectal Cancer (DCC). The initial step of signaling inside the cell after netrin-1/DCC ligation is the binding of DCC cytoplasmic P3 motif to focal adhesion targeting (FAT) domain of focal adhesion kinase (FAK). Here we report the crystal structure of P3/FAT complex. The helical P3 peptide interacts with a helix-swapped FAT dimer in a 2:2 ratio. Dimeric FAT binding is P3-specific and stabilized by a calcium ion. Biochemical studies showed that DCC-P3 motif and calcium ion could facilitate FAT dimerization in solution. Axon guidance assays confirm that the DCC/FAK complex is essential for netrin-1-induced chemoattraction. We propose that netrin-1/DCC engagement creates a small cluster of P3/FAT for FAK recruitment close to the cell membrane, which exerts a concerted effect with PIP2 for FAK signaling. We also compare P3/FAT binding with paxillin/FAT binding and discuss their distinct recognition specificity on a common FAT domain for axon attraction versus integrin signaling, respectively.

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Primary Citation of related structures