6BQW image
Deposition Date 2017-11-28
Release Date 2018-02-28
Last Version Date 2024-03-13
Entry Detail
PDB ID:
6BQW
Title:
AlfA Filament bound to AMPPNP
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
4.20 Å
Aggregation State:
FILAMENT
Reconstruction Method:
HELICAL
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Bacterial actin AlfA
Gene (Uniprot):B4U62_22515
Chain IDs:A, B, C, D, E, F, G, H, I
Chain Length:275
Number of Molecules:9
Biological Source:Bacillus subtilis
Ligand Molecules
Primary Citation
Cryo-EM structure of the bacterial actin AlfA reveals unique assembly and ATP-binding interactions and the absence of a conserved subdomain.
Proc. Natl. Acad. Sci. U.S.A. 115 3356 3361 (2018)
PMID: 29440491 DOI: 10.1073/pnas.1715836115

Abstact

Bacterial actins are an evolutionarily diverse family of ATP-dependent filaments built from protomers with a conserved structural fold. Actin-based segregation systems are encoded on many bacterial plasmids and function to partition plasmids into daughter cells. The bacterial actin AlfA segregates plasmids by a mechanism distinct from other partition systems, dependent on its unique dynamic properties. Here, we report the near-atomic resolution electron cryo-microscopy structure of the AlfA filament, which reveals a strikingly divergent filament architecture resulting from the loss of a subdomain conserved in all other actins and a mode of ATP binding. Its unusual assembly interfaces and nucleotide interactions provide insight into AlfA dynamics, and expand the range of evolutionary variation accessible to actin quaternary structure.

Legend

Protein

Chemical

Disease

Primary Citation of related structures