6BQK image
Deposition Date 2017-11-28
Release Date 2018-03-21
Last Version Date 2024-03-13
Entry Detail
PDB ID:
6BQK
Keywords:
Title:
CRYSTAL STRUCTURE OF HEPATIS C VIRUS PROTEASE (NS3) COMPLEXED WITH TRIPEPTIDIC ACYL SULFONAMIDE INHIBITOR (COMPOUND 18)
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.97 Å
R-Value Free:
0.26
R-Value Work:
0.25
R-Value Observed:
0.25
Space Group:
P 1 21 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:NS3 protease
Chain IDs:A, B
Chain Length:219
Number of Molecules:2
Biological Source:Hepatitis C virus
Primary Citation
Potent Inhibitors of Hepatitis C Virus NS3 Protease: Employment of a Difluoromethyl Group as a Hydrogen-Bond Donor.
ACS Med Chem Lett 9 143 148 (2018)
PMID: 29456803 DOI: 10.1021/acsmedchemlett.7b00503

Abstact

The design and synthesis of potent, tripeptidic acylsulfonamide inhibitors of HCV NS3 protease that contain a difluoromethyl cyclopropyl amino acid at P1 are described. A cocrystal structure of 18 with a NS3/4A protease complex suggests the presence of a H-bond between the polarized C-H of the CHF(2) moiety and the backbone carbonyl of Leu135 of the enzyme. Structure-activity relationship studies indicate that this H-bond enhances enzyme inhibitory potency by 13- and 17-fold compared to the CH(3) and CF(3) analogues, respectively, providing insight into the deployment of this unique amino acid.

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Primary Citation of related structures
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