ISDA: 6BO2

Deposition Date 2017-11-17

Release Date 2018-05-16

Last Version Date 2024-10-30

Entry Detail

PDB ID:

6BO2

Keywords:

HYDROLASE

Title:

Adducts formed after 1 month in the reaction of dichlorido(1,3-dimethylbenzimidazol-2-ylidene)(eta6-p-cymene)ruthenium(II) with HEWL

Biological Source:

Source Organism:

Gallus gallus (Taxon ID: 9031)

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

1.48 Å

R-Value Free:

0.23

R-Value Work:

0.18

R-Value Observed:

0.18

Space Group:

P 43 21 2

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Macromolecular Entities

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Lysozyme C
Gene (Uniprot):LYZ
Chain IDs:A
Chain Length:129
Number of Molecules:1
Biological Source:Gallus gallus

UniProt ID:P00698 Pfam ID:PF00062 EC:3.2.1.17

Ligand Molecules

E3D

Primary Citation

Unexpected arene ligand exchange results in the oxidation of an organoruthenium anticancer agent: the first X-ray structure of a protein-Ru(carbene) adduct.

Sullivan, M.P, Nieuwoudt, M.K, Bowmaker, G.A, Lam, N.Y.S, Truong, D, Goldstone, D.C, Hartinger, C.G.Show

Chem. Commun. (Camb.) 54 6120 6123 (2018)

PMID: 29713703 DOI: 10.1039/c8cc02433b

Abstact

The first X-ray structures of adducts formed between a RuII(N-heterocyclic carbene)(η6-p-cymene) compound and a protein are reported. Coordination to the protein induced the cleavage of the cymene ligand and EPR spectroscopy demonstrated the oxidation of the Ru centre.

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Protein

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Disease

Primary Citation of related structures

Abstact

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