6BNL image
Entry Detail
PDB ID:
6BNL
Keywords:
Title:
Crystal structure of TCR-MHC-like molecule
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2017-11-16
Release Date:
2018-04-04
Method Details:
Experimental Method:
Resolution:
2.60 Å
R-Value Free:
0.21
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Antigen-presenting glycoprotein CD1d1
Chain IDs:A, E
Chain Length:302
Number of Molecules:2
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:Beta-2-microglobulin
Chain IDs:B, F
Chain Length:99
Number of Molecules:2
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:NKT Valpha14 (MOUSE) - 2C12 TCR - Hybrid mouse variable and human constant domains
Chain IDs:C, G
Chain Length:207
Number of Molecules:2
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:NKT Vbeta8.2 (MOUSE) - 2C12 TCR - hybrid mouse variable and human constant domains
Chain IDs:D, H
Chain Length:242
Number of Molecules:2
Biological Source:Mus musculus
Primary Citation
Dual Modifications of alpha-Galactosylceramide Synergize to Promote Activation of Human Invariant Natural Killer T Cells and Stimulate Anti-tumor Immunity.
Cell Chem Biol 25 571 ? (2018)
PMID: 29576533 DOI: 10.1016/j.chembiol.2018.02.009

Abstact

Glycosylceramides that activate CD1d-restricted invariant natural killer T (iNKT) cells have potential therapeutic applications for augmenting immune responses against cancer and infections. Previous studies using mouse models identified sphinganine variants of α-galactosylceramide as promising iNKT cell activators that stimulate cytokine responses with a strongly proinflammatory bias. However, the activities of sphinganine variants in mice have generally not translated well to studies of human iNKT cell responses. Here, we show that strongly proinflammatory and anti-tumor iNKT cell responses were achieved in mice by a variant of α-galactosylceramide that combines a sphinganine base with a hydrocinnamoyl ester on C6″ of the sugar. Importantly, the activities observed with this variant were largely preserved for human iNKT cell responses. Structural and in silico modeling studies provided a mechanistic basis for these findings and suggested basic principles for capturing useful properties of sphinganine analogs of synthetic iNKT cell activators in the design of immunotherapeutic agents.

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