6BJ8 image
Entry Detail
PDB ID:
6BJ8
Keywords:
Title:
TCR55 in complex with Pep20/HLA-B35
Biological Source:
Host Organism:
PDB Version:
Deposition Date:
2017-11-05
Release Date:
2018-07-25
Method Details:
Experimental Method:
Resolution:
1.75 Å
R-Value Free:
0.18
R-Value Work:
0.15
R-Value Observed:
0.15
Space Group:
C 1 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:HLA class I histocompatibility antigen, B-35 alpha chain
Chain IDs:A
Chain Length:276
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:Beta-2-microglobulin
Chain IDs:B
Chain Length:99
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:VAL-PRO-LEU-THR-GLU-ASP-ALA-GLU-LEU
Chain IDs:E (auth: C)
Chain Length:9
Number of Molecules:1
Biological Source:synthetic construct
Polymer Type:polypeptide(L)
Description:TCR 55 alpha chain
Mutations:T161C
Chain IDs:C (auth: D)
Chain Length:204
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:TCR 55 beta chain
Mutations:A187C
Chain IDs:D (auth: H)
Chain Length:242
Number of Molecules:1
Biological Source:Homo sapiens
Primary Citation
Isolation of a Structural Mechanism for Uncoupling T Cell Receptor Signaling from Peptide-MHC Binding.
Cell 174 672 687.e27 (2018)
PMID: 30053426 DOI: 10.1016/j.cell.2018.06.017

Abstact

TCR-signaling strength generally correlates with peptide-MHC binding affinity; however, exceptions exist. We find high-affinity, yet non-stimulatory, interactions occur with high frequency in the human T cell repertoire. Here, we studied human TCRs that are refractory to activation by pMHC ligands despite robust binding. Analysis of 3D affinity, 2D dwell time, and crystal structures of stimulatory versus non-stimulatory TCR-pMHC interactions failed to account for their different signaling outcomes. Using yeast pMHC display, we identified peptide agonists of a formerly non-responsive TCR. Single-molecule force measurements demonstrated the emergence of catch bonds in the activating TCR-pMHC interactions, correlating with exclusion of CD45 from the TCR-APC contact site. Molecular dynamics simulations of TCR-pMHC disengagement distinguished agonist from non-agonist ligands based on the acquisition of catch bonds within the TCR-pMHC interface. The isolation of catch bonds as a parameter mediating the coupling of TCR binding and signaling has important implications for TCR and antigen engineering for immunotherapy.

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Primary Citation of related structures