6BHJ image
Deposition Date 2017-10-30
Release Date 2018-10-31
Last Version Date 2023-10-04
Entry Detail
PDB ID:
6BHJ
Keywords:
TRANSFERASE/DNA
Title:
Structure of HIV-1 Reverse Transcriptase Bound to a 38-mer Hairpin Template-Primer RNA-DNA Aptamer
Biological Source:
Source Organism:
Human immunodeficiency virus 1 (Taxon ID: 11676)
synthetic construct (Taxon ID: 32630)
Host Organism:
Escherichia coli
Method Details:
Experimental Method:
X-RAY DIFFRACTION
Resolution:
2.81 Å
R-Value Free:
0.24
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
P 1 21 1
6BHJ validation report
Macromolecular Entities
Protein Blast
Polymer Type:polypeptide(L)
Molecule:HIV-1 REVERSE TRANSCRIPTASE P66 subunit
Mutations:C280S, D498N
Chain IDs:A, C
Chain Length:557
Number of Molecules:2
Biological Source:Human immunodeficiency virus 1
UniProt ID:P03366 Pfam ID:PF00078, PF06817, PF06815, PF00075
Protein Blast
Polymer Type:polypeptide(L)
Molecule:HIV-1 REVERSE TRANSCRIPTASE P51 subunit
Mutations:C280S
Chain IDs:B, D
Chain Length:444
Number of Molecules:2
Biological Source:Human immunodeficiency virus 1
UniProt ID:P03366 Pfam ID:PF00078, PF06817, PF06815, PF00075
Polymer Type:polydeoxyribonucleotide/polyribonucleotide hybrid
Molecule:38-MER RNA-DNA Aptamer
Chain IDs:E, F
Chain Length:38
Number of Molecules:2
Biological Source:synthetic construct
Ligand Molecules
GOL
MG
SO4
Peptide-like Molecules
PRD_900003
Primary Citation
Integrative Structural Biology Studies of HIV-1 Reverse Transcriptase Binding to a High-Affinity DNA Aptamer
Curr Res Struct Biol ? ? ? (2020)
DOI: 10.1016/j.crstbi.2020.06.002
Primary Citation of related structures
5D3G