6BEA image
Deposition Date 2017-10-25
Release Date 2019-04-10
Last Version Date 2024-03-13
Entry Detail
PDB ID:
6BEA
Keywords:
Title:
Crystal structure of the autotransporter UpaB from E. coli strain CFT073
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.97 Å
R-Value Free:
0.21
R-Value Work:
0.17
R-Value Observed:
0.17
Space Group:
P 31 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Autotransporter protein UpaB
Gene (Uniprot):c0426
Chain IDs:A
Chain Length:466
Number of Molecules:1
Biological Source:Escherichia coli O6:H1
Primary Citation
Unique structural features of a bacterial autotransporter adhesin suggest mechanisms for interaction with host macromolecules.
Nat Commun 10 1967 1967 (2019)
PMID: 31036849 DOI: 10.1038/s41467-019-09814-6

Abstact

Autotransporters are the largest family of outer membrane and secreted proteins in Gram-negative bacteria. Most autotransporters are localised to the bacterial surface where they promote colonisation of host epithelial surfaces. Here we present the crystal structure of UpaB, an autotransporter that is known to contribute to uropathogenic E. coli (UPEC) colonisation of the urinary tract. We provide evidence that UpaB can interact with glycosaminoglycans and host fibronectin. Unique modifications to its core β-helical structure create a groove on one side of the protein for interaction with glycosaminoglycans, while the opposite face can bind fibronectin. Our findings reveal far greater diversity in the autotransporter β-helix than previously thought, and suggest that this domain can interact with host macromolecules. The relevance of these interactions during infection remains unclear.

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