ISDA

Deposition Date 2017-09-20

Release Date 2018-01-03

Last Version Date 2024-03-13

Entry Detail

PDB ID:

6B30

Keywords:

SIGNALING PROTEIN

Title:

Structure of RORgt in complex with a novel inverse agonist 1

Biological Source:

Source Organism:

Homo sapiens (Taxon ID: 9606)

Host Organism:

Escherichia coli

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

2.69 Å

R-Value Free:

0.23

R-Value Work:

0.18

R-Value Observed:

0.19

Space Group:

P 61

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Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Nuclear receptor ROR-gamma
Gene (Uniprot):RORC
Chain IDs:A, B
Chain Length:215
Number of Molecules:2
Biological Source:Homo sapiens

UniProt ID:P51449 Pfam ID:PF00104

Ligand Molecules

CFG

Primary Citation

Discovery of orally efficacious ROR gamma t inverse agonists, part 1: Identification of novel phenylglycinamides as lead scaffolds.

Shirai, J, Tomata, Y, Kono, M, Ochida, A, Fukase, Y, Sato, A, Masada, S, Kawamoto, T, Yonemori, K, Koyama, R, Nakagawa, H, Nakayama, M, Uga, K, Shibata, A, Koga, K, Okui, T, Shirasaki, M, Skene, R, Sang, B, Hoffman, I, Lane, W, Fujitani, Y, Yamasaki, M, Yamamoto, S.Show

Bioorg. Med. Chem. 26 483 500 (2018)

PMID: 29262987 DOI: 10.1016/j.bmc.2017.12.006

Abstact

A series of novel phenylglycinamides as retinoic acid receptor-related orphan receptor-gamma t (RORγt) inverse agonists were discovered through optimization of a high-throughput screen hit 1. (R)-N-(2-((3,5-Difluoro-4-(trimethylsilyl)phenyl) amino)-1-(4-methoxyphenyl)-2-oxoethyl)-3-hydroxy-N-methylisoxazole-5-carboxamide (22) was identified as one of the best of these compounds. It displayed higher subtype selectivity and specificity over other nuclear receptors and demonstrated in vivo potency to suppress the transcriptional activity of RORγt in a mouse PD (pharmacodynamic) model upon oral administration.

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Protein

Chemical

Disease

Primary Citation of related structures