6B24 image
Deposition Date 2017-09-19
Release Date 2017-10-11
Last Version Date 2023-10-04
Entry Detail
PDB ID:
6B24
Title:
Crystal structure of fluoride channel Fluc Ec2 F80Y Mutant
Biological Source:
Source Organism:
Escherichia coli (Taxon ID: 562)
Homo sapiens (Taxon ID: 9606)
Method Details:
Experimental Method:
Resolution:
2.75 Å
R-Value Free:
0.25
R-Value Work:
0.22
R-Value Observed:
0.22
Space Group:
P 41
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Fluoride ion transporter CrcB
Gene (Uniprot):crcB
Mutagens:R25K, F80Y
Chain IDs:A, B
Chain Length:126
Number of Molecules:2
Biological Source:Escherichia coli
Polymer Type:polypeptide(L)
Molecule:monobody
Chain IDs:C, D
Chain Length:96
Number of Molecules:2
Biological Source:Homo sapiens
Primary Citation
Molecular determinants of permeation in a fluoride-specific ion channel.
Elife 6 ? ? (2017)
PMID: 28952925 DOI: 10.7554/eLife.31259

Abstact

Fluoride ion channels of the Fluc family combat toxicity arising from accumulation of environmental F-. Although crystal structures are known, the densely packed pore region has precluded delineation of the ion pathway. Here we chart out the Fluc pore and characterize its chemical requirements for transport. A ladder of H-bond donating residues creates a 'polar track' demarking the ion-conduction pathway. Surprisingly, while track polarity is well conserved, polarity is nonetheless functionally dispensable at several positions. A threonine at one end of the pore engages in vital interactions through its β-branched methyl group. Two critical central phenylalanines that directly coordinate F- through a quadrupolar-ion interaction cannot be functionally substituted by aromatic, non-polar, or polar sidechains. The only functional replacement is methionine, which coordinates F- through its partially positive γ-methylene in mimicry of phenylalanine's quadrupolar interaction. These results demonstrate the unusual chemical requirements for selectively transporting the strongly H-bonding F- anion.

Legend

Protein

Chemical

Disease

Primary Citation of related structures