6AXQ image
Entry Detail
PDB ID:
6AXQ
Title:
CREBBP bromodomain in complex with Cpd6 (methyl 1H-indole-3-carboxylate)
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2017-09-07
Release Date:
2018-02-21
Method Details:
Experimental Method:
Resolution:
1.30 Å
R-Value Free:
0.21
R-Value Work:
0.19
R-Value Observed:
0.20
Space Group:
P 21 2 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:CREB-binding protein
Chain IDs:A, B, C, D
Chain Length:114
Number of Molecules:4
Biological Source:Homo sapiens
Primary Citation
A Unique Approach to Design Potent and Selective Cyclic Adenosine Monophosphate Response Element Binding Protein, Binding Protein (CBP) Inhibitors.
J. Med. Chem. 60 10151 10171 (2017)
PMID: 29155580 DOI: 10.1021/acs.jmedchem.7b01372

Abstact

The epigenetic regulator CBP/P300 presents a novel therapeutic target for oncology. Previously, we disclosed the development of potent and selective CBP bromodomain inhibitors by first identifying pharmacophores that bind the KAc region and then building into the LPF shelf. Herein, we report the "hybridization" of a variety of KAc-binding fragments with a tetrahydroquinoline scaffold that makes optimal interactions with the LPF shelf, imparting enhanced potency and selectivity to the hybridized ligand. To demonstrate the utility of our hybridization approach, two analogues containing unique Asn binders and the optimized tetrahydroquinoline moiety were rapidly optimized to yield single-digit nanomolar inhibitors of CBP with exquisite selectivity over BRD4(1) and the broader bromodomain family.

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Primary Citation of related structures