6AVN image
Entry Detail
PDB ID:
6AVN
Keywords:
Title:
Crystal structure of unbound anti-HIV antibody Fab PGV19 at 2.5 A
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2017-09-03
Release Date:
2018-06-27
Method Details:
Experimental Method:
Resolution:
2.50 Å
R-Value Free:
0.24
R-Value Work:
0.19
R-Value Observed:
0.20
Space Group:
P 43 21 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:PGV19 Fab heavy chain
Chain IDs:A (auth: H)
Chain Length:223
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:PGV19 Fab light chain
Chain IDs:B (auth: L)
Chain Length:209
Number of Molecules:1
Biological Source:Homo sapiens
Primary Citation
Structure of a cleavage-independent HIV Env recapitulates the glycoprotein architecture of the native cleaved trimer.
Nat Commun 9 1956 1956 (2018)
PMID: 29769533 DOI: 10.1038/s41467-018-04272-y

Abstact

Furin cleavage of the HIV envelope glycoprotein is an essential step for cell entry that enables formation of well-folded, native-like glycosylated trimers, releases constraints on the fusion peptide, and limits enzymatic processing of the N-glycan shield. Here, we show that a cleavage-independent, stabilized, soluble Env trimer mimic (BG505 NFL.664) exhibits a "closed-form", native-like, prefusion conformation akin to furin-cleaved Env trimers. The crystal structure of BG505 NFL.664 at 3.39 Å resolution with two potent bNAbs also identifies the full epitopes of PGV19 and PGT122 that target the receptor binding site and N332 supersite, respectively. Quantitative site-specific analysis of the glycan shield reveals that native-like glycan processing is maintained despite furin-independent maturation in the secretory pathway. Thus, cleavage-independent NFL Env trimers exhibit quaternary protein and carbohydrate structures similar to the native viral spike that further validate their potential as vaccine immunogen candidates.

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