6APG image
Deposition Date 2017-08-17
Release Date 2018-04-04
Last Version Date 2023-10-04
Entry Detail
PDB ID:
6APG
Keywords:
Title:
Trans-acting transferase from Disorazole synthase with malonate
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.00 Å
R-Value Free:
0.19
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
P 43 21 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:DisD protein
Gene (Uniprot):dszD
Chain IDs:A, B
Chain Length:281
Number of Molecules:2
Biological Source:Sorangium cellulosum
Primary Citation
The Conformational Flexibility of the Acyltransferase from the Disorazole Polyketide Synthase Is Revealed by an X-ray Free-Electron Laser Using a Room-Temperature Sample Delivery Method for Serial Crystallography.
Biochemistry 56 4751 4756 (2017)
PMID: 28832129 DOI: 10.1021/acs.biochem.7b00711

Abstact

The crystal structure of the trans-acyltransferase (AT) from the disorazole polyketide synthase (PKS) was determined at room temperature to a resolution of 2.5 Å using a new method for the direct delivery of the sample into an X-ray free-electron laser. A novel sample extractor efficiently delivered limited quantities of microcrystals directly from the native crystallization solution into the X-ray beam at room temperature. The AT structure revealed important catalytic features of this core PKS enzyme, including the occurrence of conformational changes around the active site. The implications of these conformational changes for polyketide synthase reaction dynamics are discussed.

Legend

Protein

Chemical

Disease

Primary Citation of related structures