6AP8 image
Deposition Date 2017-08-17
Release Date 2018-03-21
Last Version Date 2023-10-04
Entry Detail
PDB ID:
6AP8
Keywords:
Title:
Crystal Structure of rice D14 bound to 2-(2-methyl-3-nitroanilino)benzoic acid
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.27 Å
R-Value Free:
0.15
R-Value Work:
0.11
R-Value Observed:
0.12
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Strigolactone esterase D14
Gene (Uniprot):D14
Chain IDs:A, B
Chain Length:269
Number of Molecules:2
Biological Source:Oryza sativa subsp. japonica
Primary Citation
Inhibition of strigolactone receptors byN-phenylanthranilic acid derivatives: Structural and functional insights.
J. Biol. Chem. 293 6530 6543 (2018)
PMID: 29523686 DOI: 10.1074/jbc.RA117.001154

Abstact

The strigolactone (SL) family of plant hormones regulates a broad range of physiological processes affecting plant growth and development and also plays essential roles in controlling interactions with parasitic weeds and symbiotic fungi. Recent progress elucidating details of SL biosynthesis, signaling, and transport offers many opportunities for discovering new plant-growth regulators via chemical interference. Here, using high-throughput screening and downstream biochemical assays, we identified N-phenylanthranilic acid derivatives as potent inhibitors of the SL receptors from petunia (DAD2), rice (OsD14), and Arabidopsis (AtD14). Crystal structures of DAD2 and OsD14 in complex with inhibitors further provided detailed insights into the inhibition mechanism, and in silico modeling of 19 other plant strigolactone receptors suggested that these compounds are active across a large range of plant species. Altogether, these results provide chemical tools for investigating SL signaling and further define a framework for structure-based approaches to design and validate optimized inhibitors of SL receptors for specific plant targets.

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