6AD3 image
Deposition Date 2018-07-30
Release Date 2019-04-03
Last Version Date 2024-03-27
Entry Detail
PDB ID:
6AD3
Title:
Structural characterization of the condensation domain from Monacolin K polyketide synthase MokA
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
1.79 Å
R-Value Free:
0.20
R-Value Work:
0.17
R-Value Observed:
0.17
Space Group:
P 21 2 21
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Lovastatin nonaketide synthase mokA
Gene (Uniprot):mokA
Mutagens:R153W
Chain IDs:A
Chain Length:519
Number of Molecules:1
Biological Source:Monascus pilosus
Primary Citation
Crystal structure of the condensation domain from lovastatin polyketide synthase.
Synth Syst Biotechnol 4 10 15 (2019)
PMID: 30533541 DOI: 10.1016/j.synbio.2018.11.003

Abstact

The highly reducing iterative polyketide synthases responsible for lovastatin biosynthesis contains a section homologous to condensation (CON) domain observed in nonribosomal peptide synthetases (NRPSs). In the present study, we expressed the isolated lovastatin CON domain and solved the crystal structure to 1.79 Å resolution. The overall structure shows similarity to canonical condensation domains of NRPSs, containing the N-terminal and C-terminal subdomains that resemble enzymes of chloramphenicol acetyltransferase family, whereas distinct structural features are observed at the active site. The acceptor entry of the substrate channel is blocked by a flexible loop, thereby preventing the loading of substrate for a new round of chain elongation. The mutation of conserved catalytic motif located at the midpoint of substrate channel agrees with the incapability of CON to catalyzed amide-bond formation. The structure helps to understand the function of CON in lovastatin biosynthesis.

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Primary Citation of related structures
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