6A9E image
Entry Detail
PDB ID:
6A9E
Keywords:
Title:
Crystal structure of the N-terminal domain of Atg2
Biological Source:
PDB Version:
Deposition Date:
2018-07-13
Release Date:
2019-03-20
Method Details:
Experimental Method:
Resolution:
3.21 Å
R-Value Free:
0.26
R-Value Work:
0.22
R-Value Observed:
0.22
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Endolysin,Autophagy-related protein 2
Mutations:D20N, C54T, C97A
Chain IDs:A, B
Chain Length:389
Number of Molecules:2
Biological Source:Enterobacteria phage RB59, Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
MSE A MET modified residue
Ligand Molecules
Primary Citation
Atg2 mediates direct lipid transfer between membranes for autophagosome formation.
Nat. Struct. Mol. Biol. 26 281 288 (2019)
PMID: 30911189 DOI: 10.1038/s41594-019-0203-4

Abstact

A key event in autophagy is autophagosome formation, whereby the newly synthesized isolation membrane (IM) expands to form a complete autophagosome using endomembrane-derived lipids. Atg2 physically links the edge of the expanding IM with the endoplasmic reticulum (ER), a role that is essential for autophagosome formation. However, the molecular function of Atg2 during ER-IM contact remains unclear, as does the mechanism of lipid delivery to the IM. Here we show that the conserved amino-terminal region of Schizosaccharomyces pombe Atg2 includes a lipid-transfer-protein-like hydrophobic cavity that accommodates phospholipid acyl chains. Atg2 bridges highly curved liposomes, thereby facilitating efficient phospholipid transfer in vitro, a function that is inhibited by mutations that impair autophagosome formation in vivo. These results suggest that Atg2 acts as a lipid-transfer protein that supplies phospholipids for autophagosome formation.

Legend

Protein

Chemical

Disease

Primary Citation of related structures