6A6B image
Entry Detail
PDB ID:
6A6B
EMDB ID:
Keywords:
Title:
cryo-em structure of alpha-synuclein fiber
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2018-06-27
Release Date:
2018-07-11
Method Details:
Experimental Method:
Resolution:
3.07 Å
Aggregation State:
FILAMENT
Reconstruction Method:
HELICAL
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Alpha-synuclein
Chain IDs:A, B, C, D, E, F, G, H, I, J, K, L
Chain Length:63
Number of Molecules:12
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Amyloid fibril structure of alpha-synuclein determined by cryo-electron microscopy
Cell Res. 28 897 903 (2018)
PMID: 30065316 DOI: 10.1038/s41422-018-0075-x

Abstact

α-Synuclein (α-syn) amyloid fibrils are the major component of Lewy bodies, which are the pathological hallmark of Parkinson's disease (PD) and other synucleinopathies. High-resolution structure of α-syn fibril is important for understanding its assembly and pathological mechanism. Here, we determined a fibril structure of full-length α-syn (1-140) at the resolution of 3.07 Å by cryo-electron microscopy (cryo-EM). The fibrils are cytotoxic, and transmissible to induce endogenous α-syn aggregation in primary neurons. Based on the reconstructed cryo-EM density map, we were able to unambiguously build the fibril structure comprising residues 37-99. The α-syn amyloid fibril structure shows two protofilaments intertwining along an approximate 21 screw axis into a left-handed helix. Each protofilament features a Greek key-like topology. Remarkably, five out of the six early-onset PD familial mutations are located at the dimer interface of the fibril (H50Q, G51D, and A53T/E) or involved in the stabilization of the protofilament (E46K). Furthermore, these PD mutations lead to the formation of fibrils with polymorphic structures distinct from that of the wild-type. Our study provides molecular insight into the fibrillar assembly of α-syn at the atomic level and sheds light on the molecular pathogenesis caused by familial PD mutations of α-syn.

Legend

Protein

Chemical

Disease

Primary Citation of related structures