6A17 image
Deposition Date 2018-06-06
Release Date 2019-06-12
Last Version Date 2023-11-22
Entry Detail
PDB ID:
6A17
Keywords:
Title:
Crystal structure of CYP90B1 in complex with brassinazole
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
2.30 Å
R-Value Free:
0.27
R-Value Work:
0.23
R-Value Observed:
0.23
Space Group:
P 61 2 2
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Cytochrome P450 90B1
Gene (Uniprot):CYP90B1
Mutagens:M1-L28 was substituted with MA. E256-V277 and N435-S446 were deleted, P506L
Chain IDs:A
Chain Length:457
Number of Molecules:1
Biological Source:Arabidopsis thaliana
Primary Citation
Structural insights into a key step of brassinosteroid biosynthesis and its inhibition.
Nat.Plants 5 589 594 (2019)
PMID: 31182839 DOI: 10.1038/s41477-019-0436-6

Abstact

Brassinosteroids (BRs) are essential plant steroid hormones that regulate plant growth and development1. The most potent BR, brassinolide, is produced by addition of many oxygen atoms to campesterol by several cytochrome P450 monooxygenases (CYPs). CYP90B1 (also known as DWF4) catalyses the 22(S)-hydroxylation of campesterol and is the first and rate-limiting enzyme at the branch point of the biosynthetic pathway from sterols to BRs2. Here we show the crystal structure of Arabidopsis thaliana CYP90B1 complexed with cholesterol as a substrate. The substrate-binding conformation explains the stereoselective introduction of a hydroxy group at the 22S position, facilitating hydrogen bonding of brassinolide with the BR receptor3-5. We also determined the crystal structures of CYP90B1 complexed with uniconazole6,7 or brassinazole8, which inhibit BR biosynthesis. The two inhibitors are structurally similar; however, their binding conformations are unexpectedly different. The shape and volume of the active site pocket varies depending on which inhibitor or substrate is bound. These crystal structures of plant CYPs that function as membrane-anchored enzymes and exhibit structural plasticity can inform design of novel inhibitors targeting plant membrane-bound CYPs, including those involved in BR biosynthesis, which could then be used as plant growth regulators and agrochemicals.

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