6A00 image
Entry Detail
PDB ID:
6A00
Keywords:
Title:
The crystal structure of Mandelate oxidase with (S)-2-phenylpropionate
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2018-06-05
Release Date:
2019-06-19
Method Details:
Experimental Method:
Resolution:
1.59 Å
R-Value Free:
0.19
R-Value Work:
0.17
R-Value Observed:
0.17
Space Group:
I 4 2 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:4-hydroxymandelate oxidase
Chain IDs:A
Chain Length:377
Number of Molecules:1
Biological Source:Amycolatopsis orientalis
Primary Citation
Biochemical and structural explorations of alpha-hydroxyacid oxidases reveal a four-electron oxidative decarboxylation reaction.
Acta Crystallogr D Struct Biol 75 733 742 (2019)
PMID: 31373572 DOI: 10.1107/S2059798319009574

Abstact

p-Hydroxymandelate oxidase (Hmo) is a flavin mononucleotide (FMN)-dependent enzyme that oxidizes mandelate to benzoylformate. How the FMN-dependent oxidation is executed by Hmo remains unclear at the molecular level. A continuum of snapshots from crystal structures of Hmo and its mutants in complex with physiological/nonphysiological substrates, products and inhibitors provides a rationale for its substrate enantioselectivity/promiscuity, its active-site geometry/reactivity and its direct hydride-transfer mechanism. A single mutant, Y128F, that extends the two-electron oxidation reaction to a four-electron oxidative decarboxylation reaction was unexpectedly observed. Biochemical and structural approaches, including biochemistry, kinetics, stable isotope labeling and X-ray crystallography, were exploited to reach these conclusions and provide additional insights.

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