5svk image
Entry Detail
PDB ID:
5SVK
Title:
Crystal structure of the ATP-gated human P2X3 ion channel in the ATP-bound, open state
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2016-08-06
Release Date:
2016-09-28
Method Details:
Experimental Method:
Resolution:
2.77 Å
R-Value Free:
0.22
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
P 21 3
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:P2X purinoceptor 3
Chain IDs:A, B
Chain Length:363
Number of Molecules:2
Biological Source:Homo sapiens
Peptide-like Molecules
PRD_900001
Primary Citation
X-ray structures define human P2X3 receptor gating cycle and antagonist action.
Nature 538 66 71 (2016)
PMID: 27626375 DOI: 10.1038/nature19367

Abstact

P2X receptors are trimeric, non-selective cation channels activated by ATP that have important roles in the cardiovascular, neuronal and immune systems. Despite their central function in human physiology and although they are potential targets of therapeutic agents, there are no structures of human P2X receptors. The mechanisms of receptor desensitization and ion permeation, principles of antagonism, and complete structures of the pore-forming transmembrane domains of these receptors remain unclear. Here we report X-ray crystal structures of the human P2X3 receptor in apo/resting, agonist-bound/open-pore, agonist-bound/closed-pore/desensitized and antagonist-bound/closed states. The open state structure harbours an intracellular motif we term the 'cytoplasmic cap', which stabilizes the open state of the ion channel pore and creates lateral, phospholipid-lined cytoplasmic fenestrations for water and ion egress. The competitive antagonists TNP-ATP and A-317491 stabilize the apo/resting state and reveal the interactions responsible for competitive inhibition. These structures illuminate the conformational rearrangements that underlie P2X receptor gating and provide a foundation for the development of new pharmacological agents.

Legend

Protein

Chemical

Disease

Primary Citation of related structures