5cd8 image
Deposition Date 2015-07-03
Release Date 2015-09-02
Last Version Date 2023-11-08
Entry Detail
PDB ID:
5CD8
Title:
Crystal structure of the NTD of Drosophila Oskar protein
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.00 Å
R-Value Free:
0.24
R-Value Work:
0.18
R-Value Observed:
0.19
Space Group:
P 32
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Maternal effect protein oskar
Gene (Uniprot):osk
Chain IDs:A, B, C, D, E, F
Chain Length:93
Number of Molecules:6
Biological Source:Drosophila melanogaster
Ligand Molecules
Primary Citation
Structure of Drosophila Oskar reveals a novel RNA binding protein
Proc.Natl.Acad.Sci.USA 112 11541 11546 (2015)
PMID: 26324911 DOI: 10.1073/pnas.1515568112

Abstact

Oskar (Osk) protein plays critical roles during Drosophila germ cell development, yet its functions in germ-line formation and body patterning remain poorly understood. This situation contrasts sharply with the vast knowledge about the function and mechanism of osk mRNA localization. Osk is predicted to have an N-terminal LOTUS domain (Osk-N), which has been suggested to bind RNA, and a C-terminal hydrolase-like domain (Osk-C) of unknown function. Here, we report the crystal structures of Osk-N and Osk-C. Osk-N shows a homodimer of winged-helix-fold modules, but without detectable RNA-binding activity. Osk-C has a lipase-fold structure but lacks critical catalytic residues at the putative active site. Surprisingly, we found that Osk-C binds the 3'UTRs of osk and nanos mRNA in vitro. Mutational studies identified a region of Osk-C important for mRNA binding. These results suggest possible functions of Osk in the regulation of stability, regulation of translation, and localization of relevant mRNAs through direct interaction with their 3'UTRs, and provide structural insights into a novel protein-RNA interaction motif involving a hydrolase-related domain.

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Primary Citation of related structures