ISDA: 5ZUU

Deposition Date 2018-05-08

Release Date 2019-05-15

Last Version Date 2023-11-22

Entry Detail

PDB ID:

5ZUU

Keywords:

RNA BINDING PROTEIN/RNA

Title:

Crystal structure of AtCPSF30 YTH domain in complex with 10mer m6A-modified RNA

Biological Source:

Source Organism:

Arabidopsis thaliana (Taxon ID: 3702)
synthetic construct (Taxon ID: 32630)

Host Organism:

Escherichia coli

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

1.95 Å

R-Value Free:

0.25

R-Value Work:

0.19

R-Value Observed:

0.20

Space Group:

P 21 21 21

Download Validation Report

Macromolecular Entities

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:30-kDa cleavage and polyadenylation specificity factor 30
Gene (Uniprot):CPSF30
Chain IDs:A (auth: C), B (auth: A), C (auth: B), D
Chain Length:180
Number of Molecules:4
Biological Source:Arabidopsis thaliana

UniProt ID:A9LNK9 Pfam ID:PF04146

Polymer Type:polyribonucleotide
Molecule:RNA (5'-R(*(6MZ)P*CP*UP*AP*G)-3')
Chain IDs:E, F, G, H (auth: I)
Chain Length:10
Number of Molecules:4
Biological Source:synthetic construct

Ligand Molecules

EPE

GOL

Primary Citation

CPSF30-L-mediated recognition of mRNA m6A modification controls alternative polyadenylation of nitrate signaling-related gene transcripts in Arabidopsis.

Hou, Y, Sun, J, Wu, B, Gao, Y, Nie, H, Nie, Z, Quan, S, Wang, Y, Cao, X, Li, S.Show

Mol Plant ? ? ? (2021)

DOI: 10.1016/j.molp.2021.01.013

Primary Citation of related structures

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