ISDA: 5ZMY

Deposition Date 2018-04-06

Release Date 2018-08-08

Last Version Date 2023-11-22

Entry Detail

PDB ID:

5ZMY

Keywords:

HYDROLASE

Title:

Crystal structure of a cis-epoxysuccinate hydrolase producing D(-)-tartaric acids

Biological Source:

Source Organism:

Bordetella sp. BK-52 (Taxon ID: 454599)

Host Organism:

Escherichia coli BL21(DE3)

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

1.87 Å

R-Value Free:

0.19

R-Value Work:

0.16

R-Value Observed:

0.16

Space Group:

P 21 21 2

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Macromolecular Entities

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Cis-epoxysuccinate hydrolase
Mutagens:D115A
Chain IDs:A, B, C, D, E, F, G, H
Chain Length:314
Number of Molecules:8
Biological Source:Bordetella sp. BK-52

UniProt ID:F1LJ99 Pfam ID:PF05853

Ligand Molecules

TAR

Primary Citation

Structural insight into the catalytic mechanism of a cis-epoxysuccinate hydrolase producing enantiomerically pure d(-)-tartaric acid.

Dong, S, Liu, X, Cui, G.Z, Cui, Q, Wang, X, Feng, Y.Show

Chem. Commun. (Camb.) 54 8482 8485 (2018)

PMID: 30003205 DOI: 10.1039/c8cc04398a

Abstact

Crystal structure determination and mutagenesis analysis of a cis-epoxysuccinate hydrolase which produces enantiomerically pure d(-)-tartaric acids revealed a zinc ion and essential residues in the stereoselective mechanism for the catalytic reaction of the small mirror symmetric substrate.

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Protein

Chemical

Disease

Primary Citation of related structures

Abstact

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