5ZJG image
Deposition Date 2018-03-20
Release Date 2019-01-16
Last Version Date 2023-11-22
Entry Detail
PDB ID:
5ZJG
Keywords:
Title:
Gamma-glutamyltranspeptidase from Pseudomonas nitroreducens complexed with Gly-Gly
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.70 Å
R-Value Free:
0.18
R-Value Work:
0.15
R-Value Observed:
0.15
Space Group:
P 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Gamma-glutamyltransferase 1 Threonine peptidase. MEROPS family T03 L-subunit
Chain IDs:A, C
Chain Length:339
Number of Molecules:2
Biological Source:Pseudomonas nitroreducens
Polymer Type:polypeptide(L)
Molecule:Gamma-glutamyltransferase 1 Threonine peptidase. MEROPS family T03 S-subunit
Chain IDs:B, D
Chain Length:194
Number of Molecules:2
Biological Source:Pseudomonas nitroreducens
Primary Citation
Crystal structure analysis and enzymatic characterization of gamma-glutamyltranspeptidase from Pseudomonas nitroreducens.
Biosci. Biotechnol. Biochem. 83 262 269 (2019)
PMID: 30507352 DOI: 10.1080/09168451.2018.1547104

Abstact

Theanine (γ-glutamylethylamide) is an amino acid analog that reduces blood pressure and improves immune responses. The ϒ-glutamyltranspeptidase (GGT) from Pseudomonas nitroreducens IFO12694 (PnGGT) has a unique preference for primary amines as ϒ-glutamyl acceptors over standard L-amino acids and peptides. This characteristic is useful for the synthesis of theanine. We used X-ray crystallographic analysis to understand the structural basis of PnGGT's hydrolysis and transpeptidation reactions and to characterize its previously unidentified acceptor site. Structural studies of PnGGT have shown that key interactions between three residues (Trp385, Phe417, and Trp525) distinguish PnGGT from other GGTs. We studied the roles of these residues in the distinct biochemical properties of PnGGT using site-directed mutagenesis. All mutants showed a significant decrease in hydrolysis activity and an increase in transpeptidase activity, suggesting that the aromatic side chains of Trp385, Phe417, and Trp525 were involved in the recognition of acceptor substrates. Abbreviations: ϒ-glutamyl peptide, theanine, X-ray crystallography.

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