5ZH6 image
Deposition Date 2018-03-11
Release Date 2018-08-01
Last Version Date 2023-11-22
Entry Detail
PDB ID:
5ZH6
Keywords:
Title:
Crystal structure of Parvalbumin SPV-II of Mustelus griseus
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
1.54 Å
R-Value Free:
0.21
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Parvalbumin SPV-II
Chain IDs:A, B
Chain Length:107
Number of Molecules:2
Biological Source:Mustelus griseus
Primary Citation
Purification, Characterization, and Crystal Structure of Parvalbumins, the Major Allergens in Mustelus griseus.
J. Agric. Food Chem. 66 8150 8159 (2018)
PMID: 29969026 DOI: 10.1021/acs.jafc.8b01889

Abstact

Fish play important roles in human nutrition and health, but also trigger allergic reactions in some population. Parvalbumin (PV) represents the major allergen of fish. While IgE cross-reactivity to PV in various bony fish species has been well characterized, little information is available about allergens in cartilaginous fish. In this study, two shark PV isoforms (named as SPV-I and SPV-II) from Mustelus griseus were purified. Their identities were further confirmed by mass spectroscopic analysis. IgE immunoblot analysis showed that sera from fish-allergic patients reacted to both SPV-I and SPV-II, but the majority of sera reacted more intensely to SPV-I than SPV-II. Thermal denaturation monitored by CD spectrum showed that both of the SPV allergens are highly thermostable. SPV-I maintained its IgE-binding capability after heat denaturation, while the IgE-binding capability of SPV-II was reduced. The results of crystal structure showed that SPV-I and SPV-II were similar in their overall tertiary structure, but their amino acid sequences shared lower similarities, indicating that the differences in the IgE-binding capabilities of SPV-I and SPV-II might be due to differential antigen epitopes in these two isoforms.

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