5ZGG image
Deposition Date 2018-03-08
Release Date 2019-03-13
Last Version Date 2024-11-13
Entry Detail
PDB ID:
5ZGG
Title:
NMR structure of p75NTR transmembrane domain in complex with NSC49652
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Conformers Calculated:
100
Conformers Submitted:
10
Selection Criteria:
structures with the lowest energy
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Tumor necrosis factor receptor superfamily member 16
Gene (Uniprot):NGFR
Chain IDs:A, B
Chain Length:34
Number of Molecules:2
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
A Small Molecule Targeting the Transmembrane Domain of Death Receptor p75NTRInduces Melanoma Cell Death and Reduces Tumor Growth.
Cell Chem Biol 25 1485 1494.e5 (2018)
PMID: 30293939 DOI: 10.1016/j.chembiol.2018.09.007

Abstact

Small molecules offer powerful ways to alter protein function. However, most proteins in the human proteome lack small-molecule probes, including the large class of non-catalytic transmembrane receptors, such as death receptors. We hypothesized that small molecules targeting the interfaces between transmembrane domains (TMDs) in receptor complexes may induce conformational changes that alter receptor function. Applying this concept in a screening assay, we identified a compound targeting the TMD of death receptor p75NTR that induced profound conformational changes and receptor activity. The compound triggered apoptotic cell death dependent on p75NTR and JNK activity in neurons and melanoma cells, and inhibited tumor growth in a melanoma mouse model. Due to their small size and crucial role in receptor activation, TMDs represent attractive targets for small-molecule manipulation of receptor function.

Legend

Protein

Chemical

Disease

Primary Citation of related structures