5ZGB image
Entry Detail
PDB ID:
5ZGB
EMDB ID:
Keywords:
Title:
Cryo-EM structure of the red algal PSI-LHCR
Biological Source:
PDB Version:
Deposition Date:
2018-03-08
Release Date:
2018-04-25
Method Details:
Experimental Method:
Resolution:
3.63 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Lhcr1
Chain IDs:M (auth: 1), P (auth: 4)
Chain Length:175
Number of Molecules:2
Biological Source:Cyanidioschyzon merolae (strain 10D)
Polymer Type:polypeptide(L)
Description:Lhcr2
Chain IDs:N (auth: 2), Q (auth: 5)
Chain Length:199
Number of Molecules:2
Biological Source:Cyanidioschyzon merolae (strain 10D)
Polymer Type:polypeptide(L)
Description:Lhcr3
Chain IDs:O (auth: 3)
Chain Length:188
Number of Molecules:1
Biological Source:Cyanidioschyzon merolae strain 10D
Polymer Type:polypeptide(L)
Description:PsaA
Chain IDs:A
Chain Length:748
Number of Molecules:1
Biological Source:Cyanidioschyzon merolae (strain 10D)
Polymer Type:polypeptide(L)
Description:PsaB
Chain IDs:B
Chain Length:732
Number of Molecules:1
Biological Source:Cyanidioschyzon merolae (strain 10D)
Polymer Type:polypeptide(L)
Description:PsaC
Chain IDs:C
Chain Length:81
Number of Molecules:1
Biological Source:Cyanidioschyzon merolae (strain 10D)
Polymer Type:polypeptide(L)
Description:PsaD
Chain IDs:D
Chain Length:139
Number of Molecules:1
Biological Source:Cyanidioschyzon merolae (strain 10D)
Polymer Type:polypeptide(L)
Description:PsaE
Chain IDs:E
Chain Length:94
Number of Molecules:1
Biological Source:Cyanidioschyzon merolae (strain 10D)
Polymer Type:polypeptide(L)
Description:PsaF
Chain IDs:F
Chain Length:185
Number of Molecules:1
Biological Source:Cyanidioschyzon merolae (strain 10D)
Polymer Type:polypeptide(L)
Description:PsaI
Chain IDs:G (auth: I)
Chain Length:32
Number of Molecules:1
Biological Source:Cyanidioschyzon merolae (strain 10D)
Polymer Type:polypeptide(L)
Description:PsaJ
Chain IDs:H (auth: J)
Chain Length:38
Number of Molecules:1
Biological Source:Cyanidioschyzon merolae (strain 10D)
Polymer Type:polypeptide(L)
Description:PsaK
Chain IDs:I (auth: K)
Chain Length:60
Number of Molecules:1
Biological Source:Cyanidioschyzon merolae (strain 10D)
Polymer Type:polypeptide(L)
Description:PsaL
Chain IDs:J (auth: L)
Chain Length:140
Number of Molecules:1
Biological Source:Cyanidioschyzon merolae (strain 10D)
Polymer Type:polypeptide(L)
Description:PsaM
Chain IDs:K (auth: M)
Chain Length:29
Number of Molecules:1
Biological Source:Cyanidioschyzon merolae (strain 10D)
Polymer Type:polypeptide(L)
Description:PsaO
Chain IDs:L (auth: O)
Chain Length:155
Number of Molecules:1
Biological Source:Cyanidioschyzon merolae (strain 10D)
Primary Citation
Unique organization of photosystem I-light-harvesting supercomplex revealed by cryo-EM from a red alga
Proc. Natl. Acad. Sci. U.S.A. 115 4423 4428 (2018)
PMID: 29632169 DOI: 10.1073/pnas.1722482115

Abstact

Photosystem I (PSI) is one of the two photosystems present in oxygenic photosynthetic organisms and functions to harvest and convert light energy into chemical energy in photosynthesis. In eukaryotic algae and higher plants, PSI consists of a core surrounded by variable species and numbers of light-harvesting complex (LHC)I proteins, forming a PSI-LHCI supercomplex. Here, we report cryo-EM structures of PSI-LHCR from the red alga Cyanidioschyzon merolae in two forms, one with three Lhcr subunits attached to the side, similar to that of higher plants, and the other with two additional Lhcr subunits attached to the opposite side, indicating an ancient form of PSI-LHCI. Furthermore, the red algal PSI core showed features of both cyanobacterial and higher plant PSI, suggesting an intermediate type during evolution from prokaryotes to eukaryotes. The structure of PsaO, existing in eukaryotic organisms, was identified in the PSI core and binds three chlorophylls a and may be important in harvesting energy and in mediating energy transfer from LHCII to the PSI core under state-2 conditions. Individual attaching sites of LHCRs with the core subunits were identified, and each Lhcr was found to contain 11 to 13 chlorophylls a and 5 zeaxanthins, which are apparently different from those of LHCs in plant PSI-LHCI. Together, our results reveal unique energy transfer pathways different from those of higher plant PSI-LHCI, its adaptation to the changing environment, and the possible changes of PSI-LHCI during evolution from prokaryotes to eukaryotes.

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