5ZFG image
Deposition Date 2018-03-06
Release Date 2018-09-12
Last Version Date 2024-03-27
Entry Detail
PDB ID:
5ZFG
Keywords:
Title:
Crystal structure of a diazinon-metabolizing glutathione S-transferase in the silkworm, Bombyx mori
Biological Source:
Source Organism:
Bombyx mori (Taxon ID: 7091)
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.70 Å
R-Value Free:
0.22
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
P 41
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Glutathione S-transferase
Gene (Uniprot):bmgstu2
Chain IDs:A, B
Chain Length:233
Number of Molecules:2
Biological Source:Bombyx mori
Primary Citation
Characterisation of a diazinon-metabolising glutathione S-transferase in the silkworm Bombyx mori by X-ray crystallography and genome editing analysis.
Sci Rep 8 16835 16835 (2018)
PMID: 30443011 DOI: 10.1038/s41598-018-35207-8

Abstact

Previously, we found an unclassified glutathione S-transferase 2 (bmGSTu2) in the silkworm Bombyx mori that conjugates glutathione to 1-chloro-2,4-dinitrobenzene and also metabolises diazinon, an organophosphate insecticide. Here, we provide a structural and genome-editing characterisation of the diazinon-metabolising glutathione S-transferase in B. mori. The structure of bmGSTu2 was determined at 1.68 Å by X-ray crystallography. Mutation of putative amino acid residues in the substrate-binding site showed that Pro13, Tyr107, Ile118, Phe119, and Phe211 are crucial for enzymatic function. bmGSTu2 gene disruption resulted in a decrease in median lethal dose values to an organophosphate insecticide and a decrease in acetylcholine levels in silkworms. Taken together, these results indicate that bmGSTu2 could metabolise an organophosphate insecticide. Thus, this study provides insights into the physiological role of bmGSTu2 in silkworms, detoxification of organophosphate insecticides, and drug targets for the development of a novel insecticide.

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