5ZF1 image
Deposition Date 2018-03-02
Release Date 2019-01-23
Last Version Date 2024-03-27
Entry Detail
PDB ID:
5ZF1
Keywords:
Title:
Molecular structure of a novel 5,10-methylenetetrahydrofolate dehydrogenase from the silkworm, Bombyx mori
Biological Source:
Source Organism:
Bombyx mori (Taxon ID: 7091)
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.75 Å
R-Value Free:
0.24
R-Value Work:
0.21
R-Value Observed:
0.21
Space Group:
P 43
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:5,10-methylenetetrahydrofolate dehydrogenase
Chain IDs:A, B
Chain Length:301
Number of Molecules:2
Biological Source:Bombyx mori
Primary Citation
Molecular structure of a 5,10-methylenetetrahydrofolate dehydrogenase from the silkwormBombyx mori.
FEBS Open Bio 9 618 628 (2019)
PMID: 30984537 DOI: 10.1002/2211-5463.12595

Abstact

The enzyme 5,10-methylenetetrahydrofolate dehydrogenase (MTHFD) is essential for the production of certain amino acids (glycine, serine, and methionine) and nucleic acids (thymidylate and purine). Here, we identified a cDNA encoding this enzyme from the silkworm Bombyx mori. The recombinant B. mori MTHFD (bmMTHFD) expressed in Escherichia coli recognized 5,10-methylenetetrahydrofolate and 5,10-methenyltetrahydrofolate as substrate in the presence of NADP + as well as NAD +. The bmMTHFD structure was determined at a resolution of 1.75 Å by X-ray crystallography. Site-directed mutagenesis indicated that the amino acid residue Tyr49 contributed to its catalytic activity. Our findings provide insight into the mechanism underlying the activity of MTHFD from B. mori and potentially other insects and may therefore facilitate the development of inhibitors specific to MTHFD as insecticides.

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